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SeqSmoother: Transformer-Based Sleep Heart Rate Estimation from Wrist Accelerometers

Forum topic · 小凯 · 2026-10-07

Summary

A 2026 arXiv paper (2610.06823) by Rohan, Gupta, Debi, and Sakib introduces SeqSmoother, a transformer-based temporal corrector that estimates sleep heart rate from wrist accelerometer data. The method combines spectral descriptors, an intermediate Nightbeat-derived frequency anchor, and a physics-inspired subharmonic feature designed to detect harmonic frequency locking. All inference-time features come from the accelerometer; ECG is used only to build reference heart rate labels and quality weights for training. Evaluated with held-out folds per participant against Nightbeat's official implementation using matched 60-second windows and 15-second steps, SeqSmoother achieved a participant-macro MAE of 1.60 bpm. While Nightbeat achieved lower absolute error on intervals it retained (0.615 vs 1.091 bpm), SeqSmoother provided estimates on a much larger share of eligible records—Nightbeat produced estimates for only 72.85% of SeqSmoother's eligible out-of-sample grids. The proposed subharmonic ratio also reached an AUROC of 0.972 for identifying harmonic-locked candidates, highlighting a precision-availability trade-off between learned temporal modeling and quality-gated signal processing.

Paper Overview

  • Field: Health AI
  • Authors: Tanbin Islam Rohan, Pranjol Sen Gupta, Tanusree Debi, Nazmus Sakib
  • Published: 2026-10-05
  • arXiv: 2610.06823
  • Summary

    Large longitudinal cohorts often contain wrist accelerometer data but lack optical heart rate sensing, motivating the recovery of cardiac information from motion signals already collected during sleep. The authors propose SeqSmoother, a transformer-based temporal corrector for sleep heart rate (HR) estimation.

    SeqSmoother combines:

  • Spectral descriptors
  • An intermediate Nightbeat-derived frequency anchor
  • A physics-inspired subharmonic feature designed to identify harmonic frequency locking
  • All inference-time features are derived from the wrist accelerometer, while ECG is used only to construct reference HR labels and training label-quality weights.

    Results

    Evaluation used held-out folds separated by participant (13 participants), compared against Nightbeat's official implementation under a matched 60-second window and 15-second step protocol:

  • SeqSmoother: 1.60 bpm participant-macro MAE
  • Error on Nightbeat-retained matched intervals: Nightbeat achieved lower absolute error (0.615 vs 1.091 bpm)
  • Coverage: Nightbeat produced final estimates for only 72.85% of SeqSmoother's eligible out-of-sample grids—SeqSmoother delivered estimates on a substantially larger share of eligible records
  • Subharmonic ratio: AUROC of 0.972 for identifying reference-defined harmonic-locking candidates

Takeaway

These findings reveal a precision-availability trade-off between learned temporal modeling and quality-gated signal processing: a quality-gated baseline can be more accurate where it reports results, but learned correction offers far broader coverage at competitive overall accuracy.

Original Abstract

SeqSmoother is a transformer-based temporal corrector for sleep heart rate estimation from wrist accelerometry, achieving 1.60 bpm participant-macro MAE with broader coverage than the quality-gated Nightbeat baseline.

Tags

#health-ai#deep-learning#transformer#sleep-monitoring#heart-rate-estimation#accelerometer#arxiv

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