Summary
Verdict: highly suspicious. The dry-lab (bioinformatics) component of this Nature Communications paper appears internally coherent, but the wet-lab validation section displays fabricated-looking experimental details. The most damning evidence is in the Methods: the BRCA2 antibody is described as Abcam clone EPR23442-43, yet assigned Proteintech catalog number 29450-1-AP; the ROCK2 antibody is attributed to Santa Cruz with sc-100425, yet also given Proteintech catalog 21645-1-AP. Misplacing a vendor catalog in this manner is uncharacteristic of a real experimenter and resembles AI-hallucinated or copy-pasted text. A second concern is statistical implausibility: Figure 4h reports P = 0.0023 from a paired two-tailed t test with n = 3 biological replicates (df = 2), implying an effect size roughly 15.8 standard errors above the mean – an extraordinarily unlikely outcome in real cell-viability assays. Pixel-level image analysis was not possible because source images were not provided. Confidence is high on the catalog mismatches (textual, verifiable) and moderate on the statistical anomaly; image manipulation cannot be confirmed or excluded without raw Western blots and plate-reader files.
Verdict
🟠 Highly suspicious. Textual evidence of fabricated or AI-generated antibody metadata, combined with a statistically implausible result from a minimal sample size, raises serious concerns about the integrity of the wet-lab validation in this paper.
Key findings
- Antibody catalog/clone mismatch (Methods, Page 12, Western blot analysis): BRCA2 is described as Abcam clone
EPR23442-43 but given Proteintech catalog 29450-1-AP; ROCK2 is attributed to Santa Cruz with sc-100425 yet assigned Proteintech catalog 21645-1-AP. The -AP suffix is characteristic of Proteintech rabbit polyclonal products and is inconsistent with the stated vendor and clone information. Apparent gene aliases (FACD/FANCD1, KIAA0619) appear in place of real clone identifiers.
- Statistically implausible p-value at n = 3 (Figure 4h): A paired, two-tailed t test with n = 3 biologically independent experiments (df = 2) yields
P = 0.0023. The implied t-statistic (~15.8) requires the mean of paired differences to exceed the standard deviation by a factor of roughly 10, an outcome essentially never observed in genuine cell-viability assays.
- No image-level analysis possible: Western blot panels (Figure 4e) and cell-viability bar/scatter plots (Figures 4f, 4g) were not available for pixel-level inspection; therefore splicing, background manipulation, or duplicated bands cannot be confirmed or excluded.
Evidence highlights
- DOI:
10.1038/s41467-024-50426-6 (Nature Communications, accepted 9 July 2024).
- BRCA2: claimed vendor = Abcam, clone =
EPR23442-43, but catalog = 29450-1-AP (Proteintech product line).
- ROCK2: claimed vendor = Santa Cruz, catalog =
sc-100425, but assigned catalog = 21645-1-AP (Proteintech product line).
- Figure 4h legend states
n = 3 biologically independent experiments; reported P value = 0.0023, paired t test, two-tailed, for olaparib + RKI-1447 combination vs. monotherapy.
- Supplementary Source Data and full-membrane Western blot images were not provided to the reviewer and are required for confirmation.
Notes
- Confidence is high for the antibody metadata errors because they are verifiable from the published text alone.
- Confidence is moderate for the statistical anomaly: while the calculation is straightforward, an unusually large but genuine biological effect cannot be formally excluded without the raw plate-reader data.
- No pixel-level conclusion can be drawn regarding Figures 4e–g until the original uncropped Western blot membranes and raw cell-viability data are released.
- Recommended follow-up: request full uncropped Western blot membranes, raw plate-reader exports for the n = 3 replicates, and a PubPeer comment focusing on the catalog/clone inconsistencies and the n = 3, P = 0.0023 result.
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